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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943489.1_cds_XP_016486644.1_77465
CDS Infomation

[gene=LOC107806885] [db_xref=GeneID:107806885] [protein=probable serine/threonine-protein kinase Cx32, chloroplastic] [protein_id=XP_016486644.1] [location=complement(join(780..1228,1363..1486,1756..1898,2015..2150,4395..4726,4941..5007))] [gbkey=CDS]
Sequence

ATGGGAATTTGTTTCAGTAATGCGTCTGATAATCAGAGCCCATGTACCACTGGCCATTTC
AGTTCAGCAAGCATATCACAGACGACCAGCAACACGACATCCTCAACTGTGAGCAACGTC
TCCGGGAATAGCCAATTCTCAGCAGCCAGTGGATCAGTCGATGAGGTTTATCCGAATGGG
CAAATATTACCCCACTCCAGTTTACGGATGTTTTCTTTTACCGAACTCAAGGCCGCCACC
AGAAATTTTAGAAATGATACGGTGCTGGGAGAAGGTGGTTTTGGGAAAGTTTACAAGGGT
TGGCTTGATGAGAGGGCTTCTGCCAAGAGTGGTAGCGGCACTGTAATTGCTGTTAAGAAA
TTGAATTCTGAAAGCTTACAAGGGTTGGAAGAGTGGCAGTCTGAGGTGAATTTTCTTGGA
AGACTTTCTCATCCTAACCTGGTCAAACTCTTGGGATACTGCTGGGAAGATAAAGAGCTA
TTGCTTGTCTATGAGTTTATGCAAAAGGGCAGCTTGGAGAACCATCTCTTTGGAAGGGGC
TCTGCGGCTCAGCCACTTCCATGGAACGTAAGGCTTAAAATTGTGATTGGCGCAGCCCGA
GGCTTGGCCTTCCTACATGCATCGGAGAAGCAAGTCATTTACAGAGACTTCAAGGCTTCA
AATATATTACTTGATGGCTCTTACAATGCGAAGATATCAGATTTTGGCTTGGCAAAACTA
GGTCCTTCGGCTAGTCAATCACATGTGACTACACGGGTCATGGGAACGCATGGTTATGCT
GCTCCTGAGTATGTTGCAACAGGACACTTATACGTAAAGAGCGATGTCTATGGTTTTGGT
GTTGTTTTAGTGGAAATGCTAACAGGTCTACGGGCACTAGACACAAACCGTCCAAGCCAC
CAGCATAATCTGGTTGAATGGATTAAGCCACATTTATCTGATAGAAGGAAGTTGAAGGAC
AAGATGGATTCACGGCTGGAAGGGAAATATCCATCCAGAGCTGCAGTACAAATAGCACAA
CTGGCACTGTCATGTCTTGGACCTGAACCTAAAACCAGACCATCAATGAAAGAAGTAGTG
GAGAAACTGGAACAGATTGAAGCTGTCAATGAAAGACCCAAGGAGCCTAGAGTAAGTTCC
AGACATCAGACTGCTTATAGATATGGTCAGCAACCTTTGCACCATCGTTCTCCACTTCAT
CCAAGGCACGATGTAAATCGAGCCTATCCACTCCCAAGAAGAGCATACTGA

Peptide Sequence

PEP ID

XP_016486644.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Nicotiana tabacum]
Sequence

MGICFSNASDNQSPCTTGHFSSASISQTTSNTTSSTVSNVSGNSQFSAASGSVDEVYPNG
QILPHSSLRMFSFTELKAATRNFRNDTVLGEGGFGKVYKGWLDERASAKSGSGTVIAVKK
LNSESLQGLEEWQSEVNFLGRLSHPNLVKLLGYCWEDKELLLVYEFMQKGSLENHLFGRG
SAAQPLPWNVRLKIVIGAARGLAFLHASEKQVIYRDFKASNILLDGSYNAKISDFGLAKL
GPSASQSHVTTRVMGTHGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTGLRALDTNRPSH
QHNLVEWIKPHLSDRRKLKDKMDSRLEGKYPSRAAVQIAQLALSCLGPEPKTRPSMKEVV
EKLEQIEAVNERPKEPRVSSRHQTAYRYGQQPLHHRSPLHPRHDVNRAYPLPRRAY

Transcript Sequence

Gene sequence data has not been registered.